BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H06LP1|AL427082
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1770 0.0
>3x_Contig1753
Length = 23959
Score = 1770 bits (891), Expect = 0.0
Identities = 908/913 (99%), Gaps = 2/913 (0%)
Strand = Plus / Plus
Query: 2 atctttcatttcctggttctaccttcttactataacgtgtttttcttgggttttgggtga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17902 atctttcatttcctggttctaccttcttactataacgtgtttttcttgggttttgggtga 17961
Query: 62 ctaactttggattttgggttttttttacctgatttaggaggcgaattggaaagaaatttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17962 ctaactttggattttgggttttttttacctgatttaggaggcgaattggaaagaaatttg 18021
Query: 122 gaaaatataggcaaaawaagataatttgatgtcacgtgatgatgtgattttatattacaa 181
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18022 gaaaatataggcaaaaaaagataatttgatgtcacgtgatgatgtgattttatattacaa 18081
Query: 182 tgttattccttccagtccaagaaggaatcaaagtacacctttaagtggtgcaggcattgc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18082 tgttattccttccagtccaagaaggaatcaaagtacacctttaagtggtgcaggcattgc 18141
Query: 242 ccctcgtggttcggttgtccctattttttttttgatttatttttctggttgctaaggtta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18142 ccctcgtggttcggttgtccctattttttttttgatttatttttctggttgctaaggtta 18201
Query: 302 gcccctattttgtccgcgacaggacttttagcgttgaacaatcacataacctcatgatca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18202 gcccctattttgtccgcgacaggacttttagcgttgaacaatcacataacctcatgatca 18261
Query: 362 cccaaaatgcacctgttacttttgttttcttatcttatgttactaacaattatttttcta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18262 cccaaaatgcacctgttacttttgttttcttatcttatgttactaacaattatttttcta 18321
Query: 422 tttgggatggctgaattcacttttttggaacacctaacctacccaaacgtacggtttagt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18322 tttgggatggctgaattcacttttttggaacacctaacctacccaaacgtacggtttagt 18381
Query: 482 tccttaatctgcattctgctactcgtgatggttttttattctaaacagaggtcgctgctt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18382 tccttaatctgcattctgctactcgtgatggttttttattctaaacagaggtcgctgctt 18441
Query: 542 tagttattgacaacggttctggtatgtgtaaagccggtttcgccggtgacgacgctccaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18442 tagttattgacaacggttctggtatgtgtaaagccggtttcgccggtgacgacgctccaa 18501
Query: 602 gagccgtcttcccatccatcgtcggtagaccaagacaccaaggtatcatggtcggtatgg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18502 gagccgtcttcccatccatcgtcggtagaccaagacaccaaggtatcatggtcggtatgg 18561
Query: 662 gtcaaaaagactcttacgttggtgacgaagctcaatccaagagaggtatcttgactctac 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18562 gtcaaaaagactcttacgttggtgacgaagctcaatccaagagaggtatcttgactctac 18621
Query: 722 gttacccaattgaacacggtatcgttaccaactgggatgatatggaaaagatctggcatc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18622 gttacccaattgaacacggtatcgttaccaactgggatgatatggaaaagatctggcatc 18681
Query: 782 acaccttctacaacgaattgagagttgctccagaagaacacccagtttttgttaaccgra 841
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 18682 acaccttctacaacgaattgagagttgctccagaagaacacccag-ttttgttaaccgaa 18740
Query: 842 gctccaatgaacccaaagaacaacagagaaaagatgactcaaatctttkttcgaaacttt 901
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 18741 gctccaatgaacccaaagaacaacagagaaaagatgactcaaatc-ttgttcgaaacttt 18799
Query: 902 caacgttccagcc 914
|||||||||||||
Sbjct: 18800 caacgttccagcc 18812
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8274
Number of Sequences: 1807
Number of extensions: 8274
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)